diff --git a/apps/gpu/LBM/MusselOyster/MusselOyster.cpp b/apps/gpu/LBM/MusselOyster/MusselOyster.cpp index 9aca1ca81340e7f6f75f42412043321b3e581572..a34f55483b963b946676bc8b505e240a2b3aa149 100644 --- a/apps/gpu/LBM/MusselOyster/MusselOyster.cpp +++ b/apps/gpu/LBM/MusselOyster/MusselOyster.cpp @@ -221,6 +221,8 @@ void multipleLevel(const std::string& configPath) gridBuilder->buildGrids(LBM, true); // buildGrids() has to be called before setting the BCs!!!! + gridBuilder->findGeoFluidNodes(); + if (generatePart == 0) { gridBuilder->findCommunicationIndices(CommunicationDirections::PY, LBM); gridBuilder->setCommunicationProcess(CommunicationDirections::PY, 1); @@ -245,8 +247,6 @@ void multipleLevel(const std::string& configPath) //gridBuilder->writeGridsToVtk(path + "/" + bivalveType + "/" + std::to_string(generatePart) + "/grid/"); //gridBuilder->writeArrows(path + "/" + bivalveType + "/" + std::to_string(generatePart) + " /arrow"); - gridBuilder->findGeoFluidNodes(); - SimulationFileWriter::write(gridPath + "/" + std::to_string(generatePart) + "/", gridBuilder, FILEFORMAT::BINARY); } else { @@ -261,6 +261,8 @@ void multipleLevel(const std::string& configPath) gridBuilder->setPeriodicBoundaryCondition(false, false, true); gridBuilder->buildGrids(LBM, true); // buildGrids() has to be called before setting the BCs!!!! + gridBuilder->findGeoFluidNodes(); + ////////////////////////////////////////////////////////////////////////// gridBuilder->setVelocityBoundaryCondition(SideType::PY, vxLB, 0.0, 0.0); gridBuilder->setVelocityBoundaryCondition(SideType::MY, 0.0, 0.0, 0.0); @@ -270,8 +272,6 @@ void multipleLevel(const std::string& configPath) gridBuilder->setVelocityBoundaryCondition(SideType::GEOMETRY, 0.0, 0.0, 0.0); ////////////////////////////////////////////////////////////////////////// - gridBuilder->findGeoFluidNodes(); - //gridBuilder->writeGridsToVtk("E:/temp/MusselOyster/" + bivalveType + "/grid/"); // gridBuilder->writeArrows ("E:/temp/MusselOyster/" + bivalveType + "/arrow"); diff --git a/src/gpu/GridGenerator/grid/GridImp.cu b/src/gpu/GridGenerator/grid/GridImp.cu index 5ba3513d82b23edaf637932fb26ba00fbbf671ad..81ab4a2f65ed2e97db74bc448bccff3a78b7a7c2 100644 --- a/src/gpu/GridGenerator/grid/GridImp.cu +++ b/src/gpu/GridGenerator/grid/GridImp.cu @@ -860,13 +860,14 @@ CUDA_HOST void GridImp::updateSparseIndices() CUDA_HOST void GridImp::findFluidNodeIndices() { - for (uint index = 0; index < size; index++) { + fluidNodeIndices.clear(); + for (uint index = 0; index < this->sparseSize; index++) { int sparseIndex = sparseIndices[index]; if (sparseIndex == -1) continue; if (this->field.isFluid(index)) - fluidNodeIndices.push_back(sparseIndex); + fluidNodeIndices.push_back((uint)sparseIndex); } numberOfFluidNodes = (uint) fluidNodeIndices.size(); } diff --git a/src/gpu/VirtualFluids_GPU/Kernel/Kernels/BasicKernels/FluidFlow/Compressible/CumulantK17chimSparse/CumulantK17CompChimSparse.cu b/src/gpu/VirtualFluids_GPU/Kernel/Kernels/BasicKernels/FluidFlow/Compressible/CumulantK17chimSparse/CumulantK17CompChimSparse.cu index 26b85c03ab86c9a8b3431c14986083996ee3f931..683f04e252076712c069f9067f0c24c03f15ef23 100644 --- a/src/gpu/VirtualFluids_GPU/Kernel/Kernels/BasicKernels/FluidFlow/Compressible/CumulantK17chimSparse/CumulantK17CompChimSparse.cu +++ b/src/gpu/VirtualFluids_GPU/Kernel/Kernels/BasicKernels/FluidFlow/Compressible/CumulantK17chimSparse/CumulantK17CompChimSparse.cu @@ -31,7 +31,6 @@ void CumulantK17CompChimSparse::run() LB_Kernel_CumulantK17CompChimSparse <<< grid, threads >>>( para->getParD(level)->omega, - para->getParD(level)->geoSP, para->getParD(level)->neighborX_SP, para->getParD(level)->neighborY_SP, para->getParD(level)->neighborZ_SP, diff --git a/src/gpu/VirtualFluids_GPU/Kernel/Kernels/BasicKernels/FluidFlow/Compressible/CumulantK17chimSparse/CumulantK17CompChimSparse_Device.cu b/src/gpu/VirtualFluids_GPU/Kernel/Kernels/BasicKernels/FluidFlow/Compressible/CumulantK17chimSparse/CumulantK17CompChimSparse_Device.cu index a520ebe25a32bfbc2595edd45d67a123ce1ade73..684a89a16caa013606b395176ad0ea9d2e68d3f9 100644 --- a/src/gpu/VirtualFluids_GPU/Kernel/Kernels/BasicKernels/FluidFlow/Compressible/CumulantK17chimSparse/CumulantK17CompChimSparse_Device.cu +++ b/src/gpu/VirtualFluids_GPU/Kernel/Kernels/BasicKernels/FluidFlow/Compressible/CumulantK17chimSparse/CumulantK17CompChimSparse_Device.cu @@ -41,7 +41,6 @@ using namespace vf::lbm::constant; //////////////////////////////////////////////////////////////////////////////// extern "C" __global__ void LB_Kernel_CumulantK17CompChimSparse( real omega, - uint* typeOfGridNode, uint* neighborX, uint* neighborY, uint* neighborZ, diff --git a/src/gpu/VirtualFluids_GPU/Kernel/Kernels/BasicKernels/FluidFlow/Compressible/CumulantK17chimSparse/CumulantK17CompChimSparse_Device.cuh b/src/gpu/VirtualFluids_GPU/Kernel/Kernels/BasicKernels/FluidFlow/Compressible/CumulantK17chimSparse/CumulantK17CompChimSparse_Device.cuh index e750a08c28c8b03440fbaf1ae8e4ba4e66d7761a..9ed1fa52bc6dbbf604fa5ba5b1a451f25285ba1a 100644 --- a/src/gpu/VirtualFluids_GPU/Kernel/Kernels/BasicKernels/FluidFlow/Compressible/CumulantK17chimSparse/CumulantK17CompChimSparse_Device.cuh +++ b/src/gpu/VirtualFluids_GPU/Kernel/Kernels/BasicKernels/FluidFlow/Compressible/CumulantK17chimSparse/CumulantK17CompChimSparse_Device.cuh @@ -6,7 +6,6 @@ extern "C" __global__ void LB_Kernel_CumulantK17CompChimSparse( real omega, - uint* typeOfGridNode, uint* neighborX, uint* neighborY, uint* neighborZ,